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  5. GSVIVT01005085001

GSVIVT01005085001


Description : B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana


Gene families : OG0004345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004345_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01005085001

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g42420.1 LOC_Os03g42420 transcription factor (REM) 0.03 OrthoFinder output from all 47 species
LOC_Os03g42430.1 LOC_Os03g42430 transcription factor (REM) 0.05 OrthoFinder output from all 47 species
LOC_Os08g23570.1 LOC_Os08g23570 Putative B3 domain-containing protein Os08g0325100... 0.04 OrthoFinder output from all 47 species
LOC_Os12g40120.1 LOC_Os12g40120 transcription factor (REM) 0.05 OrthoFinder output from all 47 species
Pir_g49216 VRN1, REM39 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc11g045450.3.1 Solyc11g045450 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 304 391
IPR003340 B3_DNA-bd 32 108
No external refs found!