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  5. GSVIVT01005045001

GSVIVT01005045001 (TIF3E1, INT6,...)


Aliases : TIF3E1, INT6, ATEIF3E-1, INT-6, ATINT6, EIF3E

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3e component


Gene families : OG0003899 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003899_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01005045001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT3G57290 TIF3E1, INT6,... eukaryotic translation initiation factor 3E 0.06 OrthoFinder output from all 47 species
Aop_g03167 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Ceric.37G014400.1 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.43 TIF3E1, INT6,... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Cre12.g498100 TIF3E1, INT6,... Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
Dac_g22935 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os07g12110.1 TIF3E1, INT6,... component eIF3e of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species
MA_7274g0020 TIF3E1, INT6,... component eIF3e of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Mp3g01990.1 TIF3E1, INT6,... component eIF3e of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species
Nbi_g12534 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Pir_g09568 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Sam_g18402 No alias component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Smo269977 TIF3E1, INT6,... Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
Solyc10g079880.2.1 TIF3E1, INT6,... component eIF3e of eIF3 mRNA-to-PIC binding complex 0.07 OrthoFinder output from all 47 species
Zm00001e009393_P005 TIF3E1, INT6,... component eIF3e of eIF3 mRNA-to-PIC binding complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 231 345
IPR019010 eIF3e_N 1 83
No external refs found!