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  5. GSVIVT01004862001

GSVIVT01004862001


Description : Cell wall.hemicellulose.xylan.modification and degradation.glucuronoxylan 4-O-methyltransferase


Gene families : OG0001631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004862001
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00191940 evm_27.TU.AmTr_v1... Protein IRREGULAR XYLEM 15 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00012720 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.modification and... 0.07 OrthoFinder output from all 47 species
AT1G09610 No alias Protein of unknown function (DUF579) 0.18 OrthoFinder output from all 47 species
AT1G33800 No alias Protein of unknown function (DUF579) 0.06 OrthoFinder output from all 47 species
AT1G67330 No alias Protein of unknown function (DUF579) 0.03 OrthoFinder output from all 47 species
AT1G71690 No alias Protein of unknown function (DUF579) 0.05 OrthoFinder output from all 47 species
AT2G15440 No alias Protein of unknown function (DUF579) 0.04 OrthoFinder output from all 47 species
AT3G50220 No alias Protein of unknown function (DUF579) 0.17 OrthoFinder output from all 47 species
AT5G67210 No alias Protein of unknown function (DUF579) 0.16 OrthoFinder output from all 47 species
Adi_g009283 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g011820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33374 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14287 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g14630 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38580.t1 Aspi01Gene38580 glucuronoxylan 4-O-methyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0280.g062300 No alias not classified & original description: CDS=1-879 0.03 OrthoFinder output from all 47 species
Ceric.14G023000.1 Ceric.14G023000 not classified & original description: pacid=50634052... 0.11 OrthoFinder output from all 47 species
Ceric.38G045400.1 Ceric.38G045400 not classified & original description: pacid=50579776... 0.07 OrthoFinder output from all 47 species
Dac_g00741 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g02681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43175 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.14 OrthoFinder output from all 47 species
Dde_g15361 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_12265 No alias glucuronoxylan 4-O-methyltransferase 0.09 OrthoFinder output from all 47 species
Gb_31046 No alias glucuronoxylan 4-O-methyltransferase 0.14 OrthoFinder output from all 47 species
Gb_35413 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.13 OrthoFinder output from all 47 species
LOC_Os02g06380.1 LOC_Os02g06380 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.13 OrthoFinder output from all 47 species
LOC_Os04g55640.1 LOC_Os04g55640 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os06g47310.1 LOC_Os06g47310 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g13870.1 LOC_Os11g13870 Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g30914 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g35377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430239g0010 No alias glucuronoxylan 4-O-methyltransferase 0.1 OrthoFinder output from all 47 species
MA_195978g0010 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_58340g0010 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Msp_g12991 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00402 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g13104 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29128 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g18981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48969 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01166 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006205 No alias glucuronoxylan 4-O-methyltransferase & original... 0.03 OrthoFinder output from all 47 species
Smo57632 No alias Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana 0.12 OrthoFinder output from all 47 species
Solyc01g103360.4.1 Solyc01g103360 glucuronoxylan 4-O-methyltransferase 0.13 OrthoFinder output from all 47 species
Solyc02g064945.1.1 Solyc02g064945 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.14 OrthoFinder output from all 47 species
Solyc02g093090.1.1 Solyc02g093090 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Solyc05g015497.1.1 Solyc05g015497 Probable methyltransferase At1g27930 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc11g031950.1.1 Solyc11g031950 glucuronoxylan 4-O-methyltransferase 0.09 OrthoFinder output from all 47 species
Spa_g05421 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g24624 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g30525 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g56708 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09822 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e011047_P001 Zm00001e011047 Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
Zm00001e013688_P001 Zm00001e013688 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Zm00001e039770_P002 Zm00001e039770 glucuronoxylan 4-O-methyltransferase 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021148 Polysacc_synth_dom 103 285
No external refs found!