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  5. GSVIVT01004854001

GSVIVT01004854001


Description : Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana


Gene families : OG0000682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004854001

Target Alias Description ECC score Gene Family Method Actions
Aop_g08926 WIN2 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57981.t1 WIN2, Aspi01Gene57981 clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0037.g025917 WIN2 clade F phosphatase & original description: CDS=265-918 0.03 OrthoFinder output from all 47 species
Ehy_g05678 WIN2 clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g48300.1 WIN2, LOC_Os06g48300 Probable protein phosphatase 2C 59 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Len_g02700 WIN2 clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
MA_118899g0010 WIN2 Probable protein phosphatase 2C 59 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Ore_g06016 WIN2 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009643 WIN2 clade F phosphatase & original description: CDS=131-997 0.02 OrthoFinder output from all 47 species
Sam_g17124 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g007270.3.1 Solyc03g007270 Probable protein phosphatase 2C 76 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e006674_P002 WIN2, Zm00001e006674 Probable protein phosphatase 2C 45 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 742 829
No external refs found!