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  5. GSVIVT01004809001

GSVIVT01004809001 (EBS)


Aliases : EBS

Description : Chromatin organisation.histone modifications.histone deacetylation.SHL1 histone deacetylation complex recruiting protein


Gene families : OG0000671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004809001

Target Alias Description ECC score Gene Family Method Actions
AT4G22140 EBS PHD finger family protein / bromo-adjacent homology... 0.03 OrthoFinder output from all 47 species
Adi_g068924 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G027600.1 EBS, Ceric.03G027600 component *(SHL/EBS) of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.39G020300.1 EBS, Ceric.39G020300 component *(SHL/EBS) of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Dde_g00522 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.05 OrthoFinder output from all 47 species
Len_g00405 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
MA_14897g0020 EBS component BAH of BAH-EMF1 Polycomb silencing complex 0.04 OrthoFinder output from all 47 species
Msp_g39005 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g049210.3.1 EBS, Solyc07g049210 component BAH of BAH-EMF1 Polycomb silencing complex 0.03 OrthoFinder output from all 47 species
Zm00001e004179_P001 EBS, Zm00001e004179 component BAH of BAH-EMF1 Polycomb silencing complex 0.02 OrthoFinder output from all 47 species
Zm00001e009779_P001 EBS, Zm00001e009779 component BAH of BAH-EMF1 Polycomb silencing complex 0.05 OrthoFinder output from all 47 species
Zm00001e034034_P004 EBS, Zm00001e034034 component BAH of BAH-EMF1 Polycomb silencing complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 140 187
IPR001025 BAH_dom 23 135
No external refs found!