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  5. GSVIVT01004782001

GSVIVT01004782001


Description : RNA biosynthesis.transcriptional activation.PLATZ transcription factor


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004782001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
Aev_g12654 No alias PLATZ-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene13654.t1 Aspi01Gene13654 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47095.t2 Aspi01Gene47095 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene52963.t1 Aspi01Gene52963 PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0014.g013621 No alias PLATZ-type transcription factor & original description: CDS=1-465 0.06 OrthoFinder output from all 47 species
Azfi_s0246.g060041 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g13638 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G020700.1 Ceric.23G020700 PLATZ-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.34G037900.1 Ceric.34G037900 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g31293 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012125001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.05 OrthoFinder output from all 47 species
LOC_Os01g33370.1 LOC_Os01g33370 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
LOC_Os06g41930.2 LOC_Os06g41930 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os09g02790.1 LOC_Os09g02790 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os09g03080.1 LOC_Os09g03080 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Mp1g07250.1 No alias transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
Ore_g41201 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24743 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10046 No alias PLATZ-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g27974 No alias PLATZ-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63891 No alias PLATZ-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001788 No alias PLATZ-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002735 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020601 No alias PLATZ-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023339 No alias PLATZ-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025441 No alias not classified & original description: CDS=1-1005 0.03 OrthoFinder output from all 47 species
Smo26454 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 OrthoFinder output from all 47 species
Solyc01g091000.4.1 Solyc01g091000 transcription factor (PLATZ) 0.05 OrthoFinder output from all 47 species
Solyc02g033110.3.1 Solyc02g033110 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Solyc02g033120.3.1 Solyc02g033120 transcription factor (PLATZ) 0.05 OrthoFinder output from all 47 species
Solyc02g036140.1.1 Solyc02g036140 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Solyc02g036170.3.1 Solyc02g036170 transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
Solyc02g036200.1.1 Solyc02g036200 transcription factor (PLATZ) 0.06 OrthoFinder output from all 47 species
Solyc07g049130.1.1 Solyc07g049130 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Solyc08g005100.3.1 Solyc08g005100 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Solyc08g076860.3.1 Solyc08g076860 transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
Zm00001e023272_P001 Zm00001e023272 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 65 136
No external refs found!