GSVIVT01004469001


Description : Expansin-like B1 OS=Arabidopsis thaliana


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004469001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00240270 ATEXPL2, EXPL2,... Cell wall.cell wall proteins.expansins.alpha-like-type expansin 0.02 OrthoFinder output from all 47 species
AMTR_s00002p00195390 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.01 OrthoFinder output from all 47 species
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.01 OrthoFinder output from all 47 species
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 OrthoFinder output from all 47 species
AT4G17030 ATHEXP BETA 3.1,... expansin-like B1 0.03 OrthoFinder output from all 47 species
AT4G28250 EXPB3, ATEXPB3,... expansin B3 0.03 OrthoFinder output from all 47 species
Adi_g015058 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18902 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g21493 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g22695 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02221 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38607 EXPA8, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46764 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49200 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52112 EXP9, EXPA9,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52203 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g04935 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20979 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33159 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12770 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32260 EXP9, EXPA9,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g41940 ATEXP14, EXPA14,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58865 ATHEXP BETA 1.4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00503.t1 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene03879.t1 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene40395.t1 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45680.t1 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene52606.t1 EXPB3, ATEXPB3,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene58043.t1 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0206.g057815 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=254-1036 0.01 OrthoFinder output from all 47 species
Azfi_s0515.g074978 ATEXPA10,... alpha-class expansin & original description: CDS=109-912 0.03 OrthoFinder output from all 47 species
Azfi_s0578.g078256 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=388-1158 0.01 OrthoFinder output from all 47 species
Cba_g03639 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15318 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g56176 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G104900.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.05G087800.1 ATEXPA10,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.06G057000.1 EXPA2, ATHEXP... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.06G060200.1 EXPB1, ATEXPB1,... not classified & original description: pacid=50620745... 0.02 OrthoFinder output from all 47 species
Ceric.10G048600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.17G039400.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.17G039500.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G041300.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.25G024500.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.32G061800.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g15610 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16853 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g16993 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40575 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11792 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g24536 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g30034 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024572001 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 OrthoFinder output from all 47 species
GSVIVT01028474001 ATEXPA25,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
GSVIVT01032681001 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 OrthoFinder output from all 47 species
GSVIVT01032935001 ATHEXP ALPHA ... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01035233001 ATEXP13,... Expansin-A13 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_04404 EXP15, ATEXPA15,... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Gb_06127 EXP15, ATEXPA15,... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Gb_06139 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_10701 ATHEXP BETA 3.1,... beta-like-class expansin 0.02 OrthoFinder output from all 47 species
Gb_10702 ATHEXP BETA 3.1,... beta-like-class expansin 0.01 OrthoFinder output from all 47 species
Gb_10703 ATHEXP BETA 3.1,... beta-like-class expansin 0.01 OrthoFinder output from all 47 species
Gb_29322 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os01g16770.1 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os02g42650.1 EXPB3, ATEXPB3,... beta-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os03g01260.1 ATHEXP BETA 1.4,... Expansin-B8 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os03g01610.1 ATHEXP BETA 1.4,... Expansin-B1 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
LOC_Os03g01650.1 ATHEXP BETA 1.4,... Expansin-B1 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
LOC_Os03g04020.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g06000.1 ATEXPA11, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os03g06020.1 LOC_Os03g06020 alpha-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os03g06060.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os04g44780.1 EXPB3, ATEXPB3,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
LOC_Os05g19600.1 LOC_Os05g19600 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os05g39990.1 LOC_Os05g39990 alpha-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os12g36040.1 EXP9, EXPA9,... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Len_g15335 EXPB3, ATEXPB3,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g18203 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25335 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29406 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433559g0020 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_114349g0010 ATEXPA10,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_134413g0010 ATHEXP ALPHA... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_651027g0010 ATHEXP ALPHA... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Msp_g24299 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31390 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g31974 ATEXPA10,... alpha-class expansin & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g35092 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37017 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37532 EXPA8, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37792 ATHEXP BETA 1.4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08930 EXPB1, ATEXPB1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09043 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24717 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g28493 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g28224 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g31032 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g06275 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30056 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g31444 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004587 ATEXPA10,... alpha-class expansin & original description: CDS=259-1032 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009901 ATEXPA10,... alpha-class expansin & original description: CDS=444-1193 0.01 OrthoFinder output from all 47 species
Sam_g17226 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Smo102623 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 OrthoFinder output from all 47 species
Smo143857 ATEXPA3, EXP3,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 OrthoFinder output from all 47 species
Smo174522 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
Solyc01g112000.4.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.01 OrthoFinder output from all 47 species
Solyc03g115270.3.1 ATHEXP ALPHA ... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc05g052250.3.1 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc06g049050.3.1 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc06g060970.2.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.02 OrthoFinder output from all 47 species
Solyc08g007090.3.1 Solyc08g007090 Expansin-like B1 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Solyc08g077910.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.02 OrthoFinder output from all 47 species
Solyc09g010860.4.1 ATEXPA3, EXP3,... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Solyc10g084780.3.1 EXP9, EXPA9,... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Solyc12g089380.2.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Spa_g17657 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32551 EXP9, EXPA9,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37473 EXPA8, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40065 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40846 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000036_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e004713_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Zm00001e004716_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e017334_P001 ATEXPA10,... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Zm00001e033407_P001 ATHEXP BETA 1.1,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e037879_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e038997_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 67 124
No external refs found!