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  5. GSVIVT01003988001

GSVIVT01003988001 (TEL1)


Aliases : TEL1

Description : Protein terminal ear1 OS=Zea mays


Gene families : OG0003402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003988001

Target Alias Description ECC score Gene Family Method Actions
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.05 OrthoFinder output from all 47 species
AT1G67770 TEL2 terminal EAR1-like 2 0.07 OrthoFinder output from all 47 species
AT5G07930 MCT2 MEI2 C-terminal RRM only like 2 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042632 TEL1 not classified & original description: CDS=1-3177 0.05 OrthoFinder output from all 47 species
Azfi_s0383.g067442 TEL1 not classified & original description: CDS=310-3381 0.04 OrthoFinder output from all 47 species
Ceric.02G098500.1 TEL1, Ceric.02G098500 not classified & original description: pacid=50585133... 0.03 OrthoFinder output from all 47 species
Ceric.21G063900.1 TEL1, Ceric.21G063900 not classified & original description: pacid=50602943... 0.04 OrthoFinder output from all 47 species
Ceric.39G026900.1 TEL1, Ceric.39G026900 not classified & original description: pacid=50582960... 0.06 OrthoFinder output from all 47 species
Dcu_g20398 TEL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_20291 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Gb_21853 TEL1 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 205.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g68000.1 TEL1, LOC_Os01g68000 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
LOC_Os09g36140.1 TEL1, LOC_Os09g36140 Protein MEI2-like 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_477594g0010 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Mp1g04100.1 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008917 TEL1 not classified & original description: CDS=1-2472 0.05 OrthoFinder output from all 47 species
Solyc05g013930.2.1 TEL1, Solyc05g013930 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 355.0) 0.1 OrthoFinder output from all 47 species
Solyc05g056360.2.1 MCT1, Solyc05g056360 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.08 OrthoFinder output from all 47 species
Tin_g44662 TEL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018912_P001 TEL1, Zm00001e018912 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 874.0) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 325 434
IPR000504 RRM_dom 97 161
No external refs found!