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  5. GSVIVT01003912001

GSVIVT01003912001 (DegP10)


Aliases : DegP10

Description : Protein degradation.peptidase families.serine-type peptidase activities.Deg protease


Gene families : OG0000580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003912001

Target Alias Description ECC score Gene Family Method Actions
Ala_g22809 DegP10 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51483 DegP9 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00361.t1 DegP9, Aspi01Gene00361 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g58687 DegP9 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.68 DegP9 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Cre13.g579901 DegP9 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Dcu_g19996 DegP10 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_06473 DegP9 protease (Deg) 0.03 OrthoFinder output from all 47 species
LOC_Os05g34460.1 DegP10, LOC_Os05g34460 protease (Deg) 0.03 OrthoFinder output from all 47 species
Mp1g05470.1 DegP9 protease (Deg) 0.02 OrthoFinder output from all 47 species
Mp5g11110.1 DegP10 protease (Deg) 0.02 OrthoFinder output from all 47 species
Spa_g15197 DegP9 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015791_P002 DegP9, Zm00001e015791 protease (Deg) 0.03 OrthoFinder output from all 47 species
Zm00001e031683_P001 DegP10, Zm00001e031683 protease (Deg) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001478 PDZ 312 397
No external refs found!