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  5. GSVIVT01003684001

GSVIVT01003684001 (ATCAT6, CAT6)


Aliases : ATCAT6, CAT6

Description : Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT-type)


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003684001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00114p00137590 CAT7,... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Adi_g110142 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Als_g03085 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Dde_g29119 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01021611001 AAT1, CAT1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01034656001 ATCAT6, CAT6 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
LOC_Os12g41890.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
MA_10429855g0010 CAT7 cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Spa_g56410 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Tin_g13513 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e018123_P001 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Zm00001e030690_P001 CAT8, Zm00001e030690 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 12 323
No external refs found!