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  5. LOC_Os04g02870.1

LOC_Os04g02870.1


Description : RS31/40/41 RNA splicing factor


Gene families : OG_01_0001617 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001617_tree ,
OG_02_0001638 (LandPlants) Phylogenetic Tree(s): OG_02_0001638_tree ,
OG_03_0001180 (SeedPlants) Phylogenetic Tree(s): OG_03_0001180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g02870.1
Cluster HCCA: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000852.9 No alias RNA processing.RNA splicing.spliceosome-associated... 0.03 Archaeplastida
Cre16.g674250 No alias RNA processing.RNA splicing.spliceosome-associated... 0.04 Archaeplastida
MA_10436130g0020 No alias RS31/40/41 RNA splicing factor 0.03 Archaeplastida
Solyc01g091750.3.1 No alias RS31/40/41 RNA splicing factor 0.03 Archaeplastida
Zm00001e025270_P001 No alias RS31/40/41 RNA splicing factor 0.03 Archaeplastida
Zm00001e040621_P001 No alias RS31/40/41 RNA splicing factor 0.03 Archaeplastida
AT5G52040 At-RS41, RS41, ATRSP41 RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 LandPlants
MA_10436130g0020 No alias RS31/40/41 RNA splicing factor 0.03 LandPlants
MA_187587g0020 No alias RS31/40/41 RNA splicing factor 0.02 LandPlants
Solyc01g091750.3.1 No alias RS31/40/41 RNA splicing factor 0.03 LandPlants
Zm00001e013507_P001 No alias RS31/40/41 RNA splicing factor 0.02 LandPlants
Zm00001e025270_P001 No alias RS31/40/41 RNA splicing factor 0.03 LandPlants
Zm00001e040621_P001 No alias RS31/40/41 RNA splicing factor 0.03 LandPlants
AT5G52040 At-RS41, RS41, ATRSP41 RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 SeedPlants
MA_187587g0020 No alias RS31/40/41 RNA splicing factor 0.02 SeedPlants
Solyc01g091750.3.1 No alias RS31/40/41 RNA splicing factor 0.03 SeedPlants
Zm00001e013507_P001 No alias RS31/40/41 RNA splicing factor 0.02 SeedPlants
Zm00001e025270_P001 No alias RS31/40/41 RNA splicing factor 0.03 SeedPlants
Zm00001e040621_P001 No alias RS31/40/41 RNA splicing factor 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 4 61
IPR000504 RRM_dom 96 158
No external refs found!