LOC_Os04g02820.1


Description : mRNA-translocation factor (eEF2)


Gene families : OG_01_0001511 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001511_tree ,
OG_02_0001368 (LandPlants) Phylogenetic Tree(s): OG_02_0001368_tree ,
OG_03_0001406 (SeedPlants) Phylogenetic Tree(s): OG_03_0001406_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g02820.1
Cluster HCCA: Cluster_380

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00133570 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF2... 0.05 Archaeplastida
AT1G56070 LOS1 Ribosomal protein S5/Elongation factor G/III/V family protein 0.05 Archaeplastida
Cpa|evm.model.tig00021464.39 No alias Protein biosynthesis.translation elongation.eEF2... 0.02 Archaeplastida
Cre12.g516200 No alias Protein biosynthesis.translation elongation.eEF2... 0.04 Archaeplastida
Gb_02896 No alias mRNA-translocation factor (eEF2) 0.03 Archaeplastida
MA_10426758g0020 No alias Elongation factor 2 OS=Beta vulgaris... 0.03 Archaeplastida
Mp2g20190.1 No alias mRNA-translocation factor (eEF2) 0.03 Archaeplastida
Mp2g20200.1 No alias mRNA-translocation factor (eEF2) 0.03 Archaeplastida
Solyc08g062910.4.1 No alias mRNA-translocation factor (eEF2) 0.06 Archaeplastida
Solyc08g062920.3.1 No alias mRNA-translocation factor (eEF2) 0.04 Archaeplastida
Zm00001e006293_P001 No alias mRNA-translocation factor (eEF2) 0.07 Archaeplastida
Zm00001e006294_P001 No alias mRNA-translocation factor (eEF2) 0.07 Archaeplastida
Zm00001e029078_P002 No alias mRNA-translocation factor (eEF2) 0.14 Archaeplastida
AMTR_s00032p00133570 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF2... 0.05 LandPlants
AT1G56070 LOS1 Ribosomal protein S5/Elongation factor G/III/V family protein 0.04 LandPlants
Gb_02896 No alias mRNA-translocation factor (eEF2) 0.02 LandPlants
Mp2g20190.1 No alias mRNA-translocation factor (eEF2) 0.03 LandPlants
Mp2g20200.1 No alias mRNA-translocation factor (eEF2) 0.03 LandPlants
Pp3c11_25350V3.1 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.01 LandPlants
Pp3s128_10V3.1 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.02 LandPlants
Pp3s128_50V3.1 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.02 LandPlants
Solyc08g062910.4.1 No alias mRNA-translocation factor (eEF2) 0.06 LandPlants
Solyc08g062920.3.1 No alias mRNA-translocation factor (eEF2) 0.04 LandPlants
Zm00001e006293_P001 No alias mRNA-translocation factor (eEF2) 0.06 LandPlants
Zm00001e006294_P001 No alias mRNA-translocation factor (eEF2) 0.06 LandPlants
Zm00001e029078_P002 No alias mRNA-translocation factor (eEF2) 0.14 LandPlants
AMTR_s00032p00133570 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF2... 0.05 SeedPlants
AT1G56070 LOS1 Ribosomal protein S5/Elongation factor G/III/V family protein 0.04 SeedPlants
GSVIVT01020404001 No alias Elongation factor 2 OS=Arabidopsis thaliana 0.02 SeedPlants
Gb_02896 No alias mRNA-translocation factor (eEF2) 0.02 SeedPlants
MA_10426758g0020 No alias Elongation factor 2 OS=Beta vulgaris... 0.01 SeedPlants
Solyc08g062910.4.1 No alias mRNA-translocation factor (eEF2) 0.06 SeedPlants
Solyc08g062920.3.1 No alias mRNA-translocation factor (eEF2) 0.04 SeedPlants
Zm00001e006293_P001 No alias mRNA-translocation factor (eEF2) 0.06 SeedPlants
Zm00001e006294_P001 No alias mRNA-translocation factor (eEF2) 0.06 SeedPlants
Zm00001e029078_P002 No alias mRNA-translocation factor (eEF2) 0.14 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000640 EFG_V-like 724 811
IPR004161 EFTu-like_2 394 467
IPR041095 EFG_II 487 549
IPR000795 T_Tr_GTP-bd_dom 18 342
IPR005517 Transl_elong_EFG/EF2_IV 611 722
No external refs found!