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  5. GSVIVT01003123001

GSVIVT01003123001 (SPI)


Aliases : SPI

Description : BEACH domain-containing protein A2 OS=Arabidopsis thaliana


Gene families : OG0003198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003123001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT1G03060 SPI Beige/BEACH domain ;WD domain, G-beta repeat protein 0.12 OrthoFinder output from all 47 species
Adi_g060551 SPI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19813 SPI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30609 SPI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37984.t1 SPI, Aspi01Gene37984 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025324 SPI not classified & original description: CDS=1-3033 0.07 OrthoFinder output from all 47 species
Ceric.12G054200.1 SPI, Ceric.12G054200 not classified & original description: pacid=50600477... 0.02 OrthoFinder output from all 47 species
Dcu_g48259 SPI not classified & original description: none 0.08 OrthoFinder output from all 47 species
Gb_31352 SPI Protein SPIRRIG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g53280.1 SPI, LOC_Os03g53280 Protein SPIRRIG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g08661 SPI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13081 SPI not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_12084g0010 SPI Protein SPIRRIG OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Mp2g15880.1 SPI Protein SPIRRIG OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Ore_g04811 SPI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07878 SPI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19282 SPI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g065700.3.1 SPI, Solyc09g065700 Protein SPIRRIG OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e005644_P001 SPI, Zm00001e005644 Protein SPIRRIG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 3079 3112
IPR001680 WD40_repeat 3032 3061
IPR023362 PH-BEACH_dom 2574 2630
IPR000409 BEACH_dom 2669 2948
No external refs found!