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  5. LOC_Os04g02730.1

LOC_Os04g02730.1


Description : tRNA dihydrouridine synthase


Gene families : OG_01_0004105 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004105_tree ,
OG_02_0005233 (LandPlants) Phylogenetic Tree(s): OG_02_0005233_tree ,
OG_03_0006533 (SeedPlants) Phylogenetic Tree(s): OG_03_0006533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g02730.1
Cluster HCCA: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00185p00047700 evm_27.TU.AmTr_v1... RNA processing.RNA modification.dihydrouridylation.tRNA... 0.02 Archaeplastida
AT4G38890 No alias FMN-linked oxidoreductases superfamily protein 0.05 Archaeplastida
Cpa|evm.model.tig00000241.80 No alias RNA processing.RNA modification.dihydrouridylation.tRNA... 0.02 Archaeplastida
Cre04.g229948 No alias RNA processing.RNA modification.dihydrouridylation.tRNA... 0.06 Archaeplastida
MA_10435966g0030 No alias tRNA dihydrouridine synthase 0.03 Archaeplastida
Pp3c4_14410V3.1 No alias FMN-linked oxidoreductases superfamily protein 0.03 Archaeplastida
Solyc01g110490.4.1 No alias tRNA dihydrouridine synthase 0.03 Archaeplastida
Zm00001e040618_P001 No alias tRNA dihydrouridine synthase 0.13 Archaeplastida
AT4G38890 No alias FMN-linked oxidoreductases superfamily protein 0.04 LandPlants
MA_10435966g0030 No alias tRNA dihydrouridine synthase 0.03 LandPlants
Pp3c4_14410V3.1 No alias FMN-linked oxidoreductases superfamily protein 0.03 LandPlants
Solyc01g110490.4.1 No alias tRNA dihydrouridine synthase 0.03 LandPlants
Zm00001e040618_P001 No alias tRNA dihydrouridine synthase 0.12 LandPlants
AT4G38890 No alias FMN-linked oxidoreductases superfamily protein 0.04 SeedPlants
MA_10435966g0030 No alias tRNA dihydrouridine synthase 0.02 SeedPlants
Solyc01g110490.4.1 No alias tRNA dihydrouridine synthase 0.03 SeedPlants
Zm00001e040618_P001 No alias tRNA dihydrouridine synthase 0.12 SeedPlants

Type GO Term Name Evidence Source
BP GO:0008033 tRNA processing IEA Interproscan
MF GO:0017150 tRNA dihydrouridine synthase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001269 DUS_fam 347 581
No external refs found!