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  5. GSVIVT01002886001

GSVIVT01002886001


No description available


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01002886001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00048210 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00150110 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00131p00055770 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00138p00069300 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G39690 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
AT3G18900 No alias unknown protein; CONTAINS InterPro DOMAIN/s: Protein of... 0.04 OrthoFinder output from all 47 species
AT4G37080 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
AT5G42690 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
Adi_g115514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g39103 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G060000.1 Ceric.02G060000 not classified & original description: pacid=50584416... 0.03 OrthoFinder output from all 47 species
Ceric.05G072100.1 Ceric.05G072100 not classified & original description: pacid=50579173... 0.04 OrthoFinder output from all 47 species
Ceric.25G053000.1 Ceric.25G053000 not classified & original description: pacid=50593159... 0.04 OrthoFinder output from all 47 species
Dac_g16017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001956001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_16429 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g05480.3 LOC_Os01g05480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g64230.1 LOC_Os03g64230 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g40420.1 LOC_Os08g40420 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g59225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g01740.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g15458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g079340.3.1 Solyc04g079340 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc08g078520.4.1 Solyc08g078520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g051030.2.1 Solyc10g051030 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g14701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002322_P002 Zm00001e002322 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011955_P001 Zm00001e011955 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR006869 DUF547 7 103
No external refs found!