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  5. GSVIVT01002505001

GSVIVT01002505001 (HEMC)


Aliases : HEMC

Description : Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase


Gene families : OG0006007 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01002505001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00091590 HEMC,... Coenzyme metabolism.tetrapyrrol... 0.09 OrthoFinder output from all 47 species
AT5G08280 HEMC hydroxymethylbilane synthase 0.24 OrthoFinder output from all 47 species
Adi_g025619 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Aev_g43043 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Als_g31752 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Aob_g05018 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Aop_g06887 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Azfi_s0083.g038862 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.07 OrthoFinder output from all 47 species
Cba_g01874 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Ceric.01G124300.1 HEMC, Ceric.01G124300 EC_2.5 transferase transferring alkyl or aryl group,... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.50 HEMC Coenzyme metabolism.tetrapyrrol... 0.03 OrthoFinder output from all 47 species
Cre16.g663900 HEMC Coenzyme metabolism.tetrapyrrol... 0.08 OrthoFinder output from all 47 species
Dac_g11127 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Dde_g10954 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Ehy_g02315 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Gb_08885 HEMC porphobilinogen deaminase 0.13 OrthoFinder output from all 47 species
LOC_Os02g07230.1 HEMC, LOC_Os02g07230 porphobilinogen deaminase 0.19 OrthoFinder output from all 47 species
Len_g01736 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Lfl_g19302 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
MA_10437242g0030 HEMC porphobilinogen deaminase 0.07 OrthoFinder output from all 47 species
Mp2g07740.1 HEMC porphobilinogen deaminase 0.15 OrthoFinder output from all 47 species
Msp_g07842 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Nbi_g10234 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.08 OrthoFinder output from all 47 species
Ore_g05338 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Pir_g19742 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Pnu_g14860 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Ppi_g12249 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Sam_g39580 No alias EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Smo164683 HEMC Coenzyme metabolism.tetrapyrrol... 0.07 OrthoFinder output from all 47 species
Solyc07g066470.3.1 HEMC, Solyc07g066470 porphobilinogen deaminase 0.13 OrthoFinder output from all 47 species
Spa_g26836 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Spa_g26837 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.07 OrthoFinder output from all 47 species
Spa_g51870 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.07 OrthoFinder output from all 47 species
Tin_g13290 HEMC EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Zm00001e013727_P001 HEMC, Zm00001e013727 porphobilinogen deaminase 0.17 OrthoFinder output from all 47 species
Zm00001e025155_P001 HEMC, Zm00001e025155 porphobilinogen deaminase 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEA Interproscan
BP GO:0033014 tetrapyrrole biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR022418 Porphobilinogen_deaminase_C 246 318
IPR022417 Porphobilin_deaminase_N 21 233
No external refs found!