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  5. GSVIVT01002221001

GSVIVT01002221001


No description available


Gene families : OG0000572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000572_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01002221001

Target Alias Description ECC score Gene Family Method Actions
AT2G18360 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G36610 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
Azfi_s0075.g037625 No alias not classified & original description: CDS=84-1271 0.03 OrthoFinder output from all 47 species
Cba_g18039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G021400.1 Ceric.13G021400 not classified & original description: pacid=50636343... 0.02 OrthoFinder output from all 47 species
Gb_32048 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08090.2 LOC_Os03g08090 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g05209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_119803g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_3552g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_478906g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g17800.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g44726 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g37708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006407 No alias not classified & original description: CDS=38-1009 0.03 OrthoFinder output from all 47 species
Spa_g16291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013595 Pept_S33_TAP-like_C 2 70
No external refs found!