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  5. GSVIVT01002062001

GSVIVT01002062001


Description : Stem-specific protein TSJT1 OS=Nicotiana tabacum


Gene families : OG0000573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000573_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01002062001
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT5G43830 No alias Aluminium induced protein with YGL and LRDR motifs 0.01 OrthoFinder output from all 47 species
Adi_g012224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23715 ATAILP1, AILP1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_37955 ATAILP1, AILP1 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Gb_40778 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
MA_762051g0010 ATAILP1, AILP1 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Mp7g03680.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Nbi_g00578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23205 ATAILP1, AILP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16971 ATAILP1, AILP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g054370.2.1 ATAILP1, AILP1,... Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR024286 DUF3700 1 124
No external refs found!