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  5. GSVIVT01002021001

GSVIVT01002021001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase


Gene families : OG0001060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01002021001

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene09237.t1 Aspi01Gene09237 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07409 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g58320.2 LOC_Os04g58320 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os10g30850.1 LOC_Os10g30850 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Len_g00470 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02752 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g12970.1 No alias RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
Nbi_g06110 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01540 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02708 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006745 No alias E3 ubiquitin ligase & original description: CDS=441-1265 0.02 OrthoFinder output from all 47 species
Sam_g18727 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g078460.3.1 Solyc02g078460 RING-HC-class E3 ligase 0.07 OrthoFinder output from all 47 species
Zm00001e004453_P001 Zm00001e004453 RING-HC-class E3 ligase 0.05 OrthoFinder output from all 47 species
Zm00001e004685_P002 Zm00001e004685 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!