Aliases : GDC1
Description : Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana
Gene families : OG0006316 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006316_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01002001001 | |
Cluster | HCCA: Cluster_79 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00062p00076280 | GDC1,... | Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
AT1G50900 | GDC1 | Ankyrin repeat family protein | 0.19 | OrthoFinder output from all 47 species | |
Adi_g005475 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g02742 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g00497 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.06 | OrthoFinder output from all 47 species | |
Aop_g15935 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0034.g025338 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.01G109700.1 | GDC1, Ceric.01G109700 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.1Z282600.1 | GDC1, Ceric.1Z282600 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.04 | OrthoFinder output from all 47 species | |
Cre12.g551950 | GDC1 | Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
Dac_g00424 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g05121 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g00160 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.03 | OrthoFinder output from all 47 species | |
Gb_05108 | GDC1 | SRP insertion system TIC-to-SRP handover factor (LTD) | 0.06 | OrthoFinder output from all 47 species | |
Gb_05109 | GDC1 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os07g33660.1 | GDC1, LOC_Os07g33660 | SRP insertion system TIC-to-SRP handover factor (LTD) | 0.09 | OrthoFinder output from all 47 species | |
Len_g02031 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.15 | OrthoFinder output from all 47 species | |
Lfl_g00282 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.09 | OrthoFinder output from all 47 species | |
MA_450177g0010 | GDC1 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
Mp3g06400.1 | GDC1 | SRP insertion system TIC-to-SRP handover factor (LTD) | 0.19 | OrthoFinder output from all 47 species | |
Msp_g05859 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g01699 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g00819 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g26583 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c5_16520V3.1 | GDC1, Pp3c5_16520 | Ankyrin repeat family protein | 0.06 | OrthoFinder output from all 47 species | |
Ppi_g04901 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0006.g002932 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g23702 | No alias | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.12 | OrthoFinder output from all 47 species | |
Solyc10g006370.3.1 | GDC1, Solyc10g006370 | SRP insertion system TIC-to-SRP handover factor (LTD) | 0.07 | OrthoFinder output from all 47 species | |
Spa_g51015 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e035117_P001 | GDC1, Zm00001e035117 | SRP insertion system TIC-to-SRP handover factor (LTD) | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
CC | GO:0009512 | cytochrome b6f complex | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009522 | photosystem I | IEP | HCCA |
CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016872 | intramolecular lyase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
CC | GO:0070069 | cytochrome complex | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |