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  5. GSVIVT01001956001

GSVIVT01001956001


No description available


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001956001
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT3G12540 No alias Protein of unknown function, DUF547 0.04 OrthoFinder output from all 47 species
Adi_g060878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11890 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene62766.t1 Aspi01Gene62766 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G072100.1 Ceric.05G072100 not classified & original description: pacid=50579173... 0.03 OrthoFinder output from all 47 species
Ceric.19G019200.1 Ceric.19G019200 not classified & original description: pacid=50576159... 0.03 OrthoFinder output from all 47 species
Ceric.25G053000.1 Ceric.25G053000 not classified & original description: pacid=50593159... 0.02 OrthoFinder output from all 47 species
Ceric.28G000600.1 Ceric.28G000600 not classified & original description: pacid=50570870... 0.02 OrthoFinder output from all 47 species
Dac_g13842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01002634001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01002886001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01025228001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01029449001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g05480.3 LOC_Os01g05480 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g64230.1 LOC_Os03g64230 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g40420.1 LOC_Os08g40420 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g27106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000442 No alias not classified & original description: CDS=698-2671 0.04 OrthoFinder output from all 47 species
Sam_g35283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g008560.2.1 Solyc06g008560 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g13793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011613_P001 Zm00001e011613 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e021904_P001 Zm00001e021904 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR006869 DUF547 11 59
No external refs found!