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  5. GSVIVT01001772001

GSVIVT01001772001


No description available


Gene families : OG0001860 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001860_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001772001
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT1G22600 No alias Late embryogenesis abundant protein (LEA) family protein 0.1 OrthoFinder output from all 47 species
AT1G72100 No alias late embryogenesis abundant domain-containing protein /... 0.21 OrthoFinder output from all 47 species
Azfi_s0094.g043407 No alias not classified & original description: CDS=1-2121 0.06 OrthoFinder output from all 47 species
Ceric.06G034100.1 Ceric.06G034100 not classified & original description: pacid=50619971... 0.04 OrthoFinder output from all 47 species
Dac_g08104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g35490.1 LOC_Os04g35490 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
Mp1g01170.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g18411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60162 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g21982 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g26311 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo440470 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc06g065050.2.1 Solyc06g065050 no hits & (original description: none) 0.21 OrthoFinder output from all 47 species
Solyc11g022530.3.1 Solyc11g022530 no hits & (original description: none) 0.19 OrthoFinder output from all 47 species
Zm00001e040896_P001 Zm00001e040896 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR025423 DUF4149 108 208
No external refs found!