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  5. GSVIVT01001633001

GSVIVT01001633001


Description : Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana


Gene families : OG0001496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001633001
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT1G03670 No alias ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
AT4G03470 No alias Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
AT4G14400 ACD6 ankyrin repeat family protein 0.04 OrthoFinder output from all 47 species
GSVIVT01001651001 No alias Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
GSVIVT01010731001 No alias Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
GSVIVT01013543001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01013569001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01013583001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01020517001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01020519001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01030371001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01030372001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_08870 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Gb_26479 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_40389 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os07g09530.1 LOC_Os07g09530 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os07g29940.1 LOC_Os07g29940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g34780.1 XBAT33, LOC_Os07g34780 Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g16760.1 LOC_Os09g16760 Ankyrin repeat-containing protein At2g01680... 0.04 OrthoFinder output from all 47 species
LOC_Os11g09190.1 LOC_Os11g09190 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g14570.1 LOC_Os11g14570 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Solyc05g055970.4.1 Solyc05g055970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g061740.4.1 Solyc07g061740 Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
Solyc07g061750.4.1 Solyc07g061750 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e035134_P003 Zm00001e035134 Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR026961 PGG_dom 314 418
IPR020683 DUF3447 53 155
IPR020683 DUF3447 162 229
No external refs found!