- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
No description available
Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01001510001 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00085p00122470 | No alias | External stimuli response.biotic stress.pathogen... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G31540 | No alias | Disease resistance protein (TIR-NBS-LRR class) family | 0.04 | OrthoFinder output from all 47 species | |
| AT1G56510 | WRR4, ADR2 | Disease resistance protein (TIR-NBS-LRR class) | 0.04 | OrthoFinder output from all 47 species | |
| AT1G56520 | No alias | Disease resistance protein (TIR-NBS-LRR class) family | 0.04 | OrthoFinder output from all 47 species | |
| AT1G63880 | No alias | Disease resistance protein (TIR-NBS-LRR class) family | 0.04 | OrthoFinder output from all 47 species | |
| AT1G69550 | No alias | disease resistance protein (TIR-NBS-LRR class) | 0.05 | OrthoFinder output from all 47 species | |
| AT1G72900 | No alias | Toll-Interleukin-Resistance (TIR) domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G16870 | No alias | Disease resistance protein (TIR-NBS-LRR class) family | 0.05 | OrthoFinder output from all 47 species | |
| AT3G04210 | No alias | Disease resistance protein (TIR-NBS class) | 0.03 | OrthoFinder output from all 47 species | |
| AT3G25510 | No alias | disease resistance protein (TIR-NBS-LRR class), putative | 0.06 | OrthoFinder output from all 47 species | |
| AT3G44480 | cog1, RPP1 | Disease resistance protein (TIR-NBS-LRR class) family | 0.04 | OrthoFinder output from all 47 species | |
| AT4G11170 | No alias | Disease resistance protein (TIR-NBS-LRR class) family | 0.03 | OrthoFinder output from all 47 species | |
| AT4G16990 | RLM3 | disease resistance protein (TIR-NBS class), putative | 0.03 | OrthoFinder output from all 47 species | |
| AT5G11250 | No alias | Disease resistance protein (TIR-NBS-LRR class) | 0.04 | OrthoFinder output from all 47 species | |
| AT5G18360 | No alias | Disease resistance protein (TIR-NBS-LRR class) family | 0.04 | OrthoFinder output from all 47 species | |
| AT5G22690 | No alias | Disease resistance protein (TIR-NBS-LRR class) family | 0.03 | OrthoFinder output from all 47 species | |
| AT5G38344 | No alias | Toll-Interleukin-Resistance (TIR) domain family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G44510 | TAO1 | target of AVRB operation1 | 0.06 | OrthoFinder output from all 47 species | |
| AT5G46260 | No alias | disease resistance protein (TIR-NBS-LRR class) family | 0.03 | OrthoFinder output from all 47 species | |
| AT5G46450 | No alias | Disease resistance protein (TIR-NBS-LRR class) family | 0.04 | OrthoFinder output from all 47 species | |
| AT5G46470 | RPS6 | disease resistance protein (TIR-NBS-LRR class) family | 0.04 | OrthoFinder output from all 47 species | |
| AT5G46490 | No alias | Disease resistance protein (TIR-NBS-LRR class) family | 0.07 | OrthoFinder output from all 47 species | |
| AT5G46520 | No alias | Disease resistance protein (TIR-NBS-LRR class) family | 0.09 | OrthoFinder output from all 47 species | |
| AT5G51630 | No alias | Disease resistance protein (TIR-NBS-LRR class) family | 0.05 | OrthoFinder output from all 47 species | |
| AT5G58120 | No alias | Disease resistance protein (TIR-NBS-LRR class) family | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g066626 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g080319 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g39483 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g13001 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003262001 | No alias | TMV resistance protein N OS=Nicotiana glutinosa | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01012796001 | No alias | Disease resistance-like protein DSC1 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01012798001 | No alias | Disease resistance-like protein DSC1 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01020962001 | No alias | TMV resistance protein N OS=Nicotiana glutinosa | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01020964001 | No alias | TMV resistance protein N OS=Nicotiana glutinosa | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01022990001 | TIR | External stimuli response.biotic stress.pathogen... | 0.15 | OrthoFinder output from all 47 species | |
| GSVIVT01023025001 | No alias | TMV resistance protein N OS=Nicotiana glutinosa | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01026001001 | No alias | External stimuli response.biotic stress.pathogen... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01026098001 | No alias | External stimuli response.biotic stress.pathogen... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01026099001 | No alias | External stimuli response.biotic stress.pathogen... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01029009001 | No alias | Disease resistance-like protein DSC1 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01036294001 | No alias | External stimuli response.biotic stress.pathogen... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01036304001 | No alias | External stimuli response.biotic stress.pathogen... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01037180001 | No alias | External stimuli response.biotic stress.pathogen... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_21493 | No alias | TMV resistance protein N OS=Nicotiana glutinosa... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10189965g0010 | No alias | effector receptor (NLR) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10313519g0010 | No alias | effector receptor (NLR) | 0.04 | OrthoFinder output from all 47 species | |
| MA_10429769g0010 | No alias | effector receptor (NLR) | 0.04 | OrthoFinder output from all 47 species | |
| MA_10432202g0030 | No alias | effector receptor (NLR) | 0.09 | OrthoFinder output from all 47 species | |
| MA_129800g0010 | No alias | TMV resistance protein N OS=Nicotiana glutinosa... | 0.03 | OrthoFinder output from all 47 species | |
| MA_20580g0030 | No alias | TMV resistance protein N OS=Nicotiana glutinosa... | 0.04 | OrthoFinder output from all 47 species | |
| MA_20580g0040 | No alias | effector receptor (NLR) | 0.05 | OrthoFinder output from all 47 species | |
| MA_232404g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_263716g0010 | No alias | TMV resistance protein N OS=Nicotiana glutinosa... | 0.03 | OrthoFinder output from all 47 species | |
| MA_395749g0010 | No alias | effector receptor (NLR) | 0.04 | OrthoFinder output from all 47 species | |
| MA_397657g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_4175g0020 | No alias | TMV resistance protein N OS=Nicotiana glutinosa... | 0.03 | OrthoFinder output from all 47 species | |
| MA_5053586g0010 | No alias | effector receptor (NLR) | 0.04 | OrthoFinder output from all 47 species | |
| MA_509167g0010 | No alias | effector receptor (NLR) | 0.04 | OrthoFinder output from all 47 species | |
| MA_5433154g0010 | No alias | effector receptor (NLR) | 0.03 | OrthoFinder output from all 47 species | |
| MA_6891298g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_8328499g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_85844g0010 | No alias | effector receptor (NLR) | 0.04 | OrthoFinder output from all 47 species | |
| MA_8647159g0010 | No alias | TMV resistance protein N OS=Nicotiana glutinosa... | 0.03 | OrthoFinder output from all 47 species | |
| MA_894630g0010 | No alias | effector receptor (NLR) | 0.03 | OrthoFinder output from all 47 species | |
| MA_9584314g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g25030 | No alias | effector receptor *(NLR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g30781 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g52052 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c26_15380V3.1 | Pp3c26_15380 | disease resistance protein (TIR-NBS-LRR class), putative | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c4_30410V3.1 | Pp3c4_30410 | Disease resistance protein (TIR-NBS-LRR class) family | 0.01 | OrthoFinder output from all 47 species | |
| Solyc01g008800.3.1 | Solyc01g008800 | effector receptor (NLR) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g102840.3.1 | Solyc01g102840 | effector receptor (NLR) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g102850.3.1 | Solyc01g102850 | effector receptor (NLR) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |