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  5. GSVIVT01001467001

GSVIVT01001467001


Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0000627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001467001

Target Alias Description ECC score Gene Family Method Actions
Adi_g014190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g125875 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008616 No alias not classified & original description: CDS=390-1862 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037780 No alias not classified & original description: CDS=1-1272 0.03 OrthoFinder output from all 47 species
Dcu_g19340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g21140.1 LOC_Os03g21140 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os07g48410.1 LOC_Os07g48410 C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
MA_479847g0010 No alias C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Pir_g54278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g13313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020869_P004 Zm00001e020869 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e035876_P001 Zm00001e035876 C3H zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
Zm00001e038256_P001 Zm00001e038256 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 152 172
IPR000504 RRM_dom 294 338
No external refs found!