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  5. GSVIVT01001453001

GSVIVT01001453001


Description : Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana


Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001453001
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT3G14470 No alias NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
Adi_g085043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000655001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
GSVIVT01000666001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.07 OrthoFinder output from all 47 species
GSVIVT01000813001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01000840001 No alias Putative disease resistance protein RGA3 OS=Solanum bulbocastanum 0.03 OrthoFinder output from all 47 species
GSVIVT01000871001 No alias Putative disease resistance RPP13-like protein 1... 0.1 OrthoFinder output from all 47 species
GSVIVT01001450001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01001459001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
GSVIVT01003817001 No alias Putative disease resistance RPP13-like protein 1... 0.07 OrthoFinder output from all 47 species
GSVIVT01004013001 No alias Putative disease resistance protein At3g14460... 0.06 OrthoFinder output from all 47 species
GSVIVT01004064001 No alias Putative disease resistance RPP13-like protein 1... 0.08 OrthoFinder output from all 47 species
GSVIVT01006243001 No alias Putative disease resistance protein At3g14460... 0.06 OrthoFinder output from all 47 species
GSVIVT01007029001 No alias Putative disease resistance RPP13-like protein 1... 0.06 OrthoFinder output from all 47 species
GSVIVT01022856001 No alias Putative disease resistance RPP13-like protein 1... 0.07 OrthoFinder output from all 47 species
GSVIVT01022864001 No alias Putative disease resistance protein At3g14460... 0.04 OrthoFinder output from all 47 species
GSVIVT01022931001 No alias Putative disease resistance RPP13-like protein 1... 0.06 OrthoFinder output from all 47 species
GSVIVT01022937001 No alias Putative disease resistance RPP13-like protein 1... 0.07 OrthoFinder output from all 47 species
GSVIVT01022961001 No alias Putative disease resistance RPP13-like protein 1... 0.06 OrthoFinder output from all 47 species
GSVIVT01022962001 No alias Putative disease resistance protein RGA3 OS=Solanum bulbocastanum 0.06 OrthoFinder output from all 47 species
GSVIVT01022963001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
GSVIVT01022965001 No alias Putative disease resistance RPP13-like protein 1... 0.06 OrthoFinder output from all 47 species
GSVIVT01023312001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
GSVIVT01023324001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
GSVIVT01027229001 No alias Putative disease resistance RPP13-like protein 1... 0.08 OrthoFinder output from all 47 species
GSVIVT01027270001 No alias Putative disease resistance protein At3g14460... 0.05 OrthoFinder output from all 47 species
GSVIVT01027276001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01032171001 No alias Putative disease resistance RPP13-like protein 1... 0.09 OrthoFinder output from all 47 species
GSVIVT01032189001 No alias Putative disease resistance RPP13-like protein 1... 0.09 OrthoFinder output from all 47 species
GSVIVT01036610001 No alias Putative disease resistance RPP13-like protein 1... 0.07 OrthoFinder output from all 47 species
GSVIVT01038298001 No alias Putative disease resistance RPP13-like protein 1... 0.1 OrthoFinder output from all 47 species
LOC_Os12g32660.1 LOC_Os12g32660 Putative disease resistance protein RGA4 OS=Solanum... 0.07 OrthoFinder output from all 47 species
Solyc09g005290.1.1 Solyc09g005290 Putative disease resistance protein RGA1 OS=Solanum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 130 191
IPR001611 Leu-rich_rpt 295 328
No external refs found!