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  5. GSVIVT01001374001

GSVIVT01001374001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001374001
Cluster HCCA: Cluster_380

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00190540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Als_g09581 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G081900.1 Ceric.14G081900 GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dcu_g04782 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g01480.1 LOC_Os11g01480 Putative Myb family transcription factor At1g14600... 0.01 OrthoFinder output from all 47 species
LOC_Os12g01490.1 LOC_Os12g01490 Putative Myb family transcription factor At1g14600... 0.01 OrthoFinder output from all 47 species
Lfl_g01284 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g06174 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04816 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Solyc10g078720.2.1 Solyc10g078720 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 291 334
IPR001005 SANT/Myb 210 259
No external refs found!