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  5. GSVIVT01001194001

GSVIVT01001194001 (MCCA)


Aliases : MCCA

Description : Amino acid metabolism.degradation.branched-chain amino acid.leucine.methylcrotonoyl-CoA carboxylase complex.alpha subunit


Gene families : OG0001087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001194001

Target Alias Description ECC score Gene Family Method Actions
AT1G03090 MCCA methylcrotonyl-CoA carboxylase alpha chain,... 0.04 OrthoFinder output from all 47 species
Aev_g18383 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.02 OrthoFinder output from all 47 species
Ceric.23G000300.1 MCCA, Ceric.23G000300 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
LOC_Os12g41250.1 MCCA, LOC_Os12g41250 subunit alpha of methylcrotonoyl-CoA carboxylase complex 0.04 OrthoFinder output from all 47 species
Mp8g15290.1 MCCA subunit alpha of methylcrotonoyl-CoA carboxylase complex 0.05 OrthoFinder output from all 47 species
Ore_g16888 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.02 OrthoFinder output from all 47 species
Pp3c8_7840V3.1 CAC2, Pp3c8_7840 acetyl Co-enzyme a carboxylase biotin carboxylase subunit 0.01 OrthoFinder output from all 47 species
Ppi_g13611 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.02 OrthoFinder output from all 47 species
Ppi_g60526 MCCA EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g08461 No alias EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Solyc09g065540.3.1 MCCA, Solyc09g065540 subunit alpha of methylcrotonoyl-CoA carboxylase complex 0.03 OrthoFinder output from all 47 species
Spa_g01735 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 147 355
IPR005482 Biotin_COase_C 369 476
IPR005481 BC-like_N 34 142
IPR000089 Biotin_lipoyl 664 728
No external refs found!