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  5. GSVIVT01001137001

GSVIVT01001137001 (RPL10B)


Aliases : RPL10B

Description : 60S ribosomal protein L10 OS=Vitis riparia


Gene families : OG0001847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001847_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001137001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00080890 RPL10B,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
AMTR_s00077p00151750 RPL10B,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT1G14320 SAC52, RPL10, RPL10A Ribosomal protein L16p/L10e family protein 0.23 OrthoFinder output from all 47 species
AT1G26910 RPL10B Ribosomal protein L16p/L10e family protein 0.1 OrthoFinder output from all 47 species
Adi_g019250 RPL10B component *(uL16) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Als_g51397 RPL10B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04834 RPL10B component *(uL16) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000052 RPL10B component *(uL16) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Azfi_s1282.g100862 RPL10B component *(uL16) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.10G071500.1 RPL10B, Ceric.10G071500 component *(uL16) of large ribosomal-subunit (LSU)... 0.13 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001424.5 RPL10C, SAG24 Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder output from all 47 species
Gb_06067 RPL10B component RPL10 of LSU proteome component 0.13 OrthoFinder output from all 47 species
LOC_Os11g11390.1 RPL10B, LOC_Os11g11390 component RPL10 of LSU proteome component 0.09 OrthoFinder output from all 47 species
MA_17326g0010 SAC52, RPL10, RPL10A component RPL10 of LSU proteome component 0.2 OrthoFinder output from all 47 species
Mp4g23990.1 RPL10B component RPL10 of LSU proteome component 0.26 OrthoFinder output from all 47 species
Msp_g21522 RPL10B component *(uL16) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Nbi_g09642 RPL10B component *(uL16) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Pir_g10010 RPL10B component *(uL16) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c11_4130V3.1 RPL10B, Pp3c11_4130 Ribosomal protein L16p/L10e family protein 0.08 OrthoFinder output from all 47 species
Pp3c2_29600V3.1 RPL10B, Pp3c2_29600 Ribosomal protein L16p/L10e family protein 0.1 OrthoFinder output from all 47 species
Pp3c7_22400V3.1 RPL10B, Pp3c7_22400 Ribosomal protein L16p/L10e family protein 0.09 OrthoFinder output from all 47 species
Ppi_g26211 RPL10B component *(uL16) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ppi_g62311 RPL10B component *(uL16) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g08903 No alias component *(uL16) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Smo437527 RPL10B Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Solyc06g007520.4.1 RPL10B, Solyc06g007520 component RPL10 of LSU proteome component 0.27 OrthoFinder output from all 47 species
Solyc06g082650.4.1 SAC52, RPL10,... component RPL10 of LSU proteome component 0.28 OrthoFinder output from all 47 species
Solyc06g082670.3.1 RPL10B, Solyc06g082670 component RPL10 of LSU proteome component 0.22 OrthoFinder output from all 47 species
Spa_g18494 RPL10B component *(uL16) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g51059 RPL10C, SAG24 component *(uL16) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Zm00001e004933_P001 RPL10B, Zm00001e004933 component RPL10 of LSU proteome component 0.16 OrthoFinder output from all 47 species
Zm00001e012474_P002 RPL10C, SAG24,... component RPL10 of LSU proteome component 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 13 55
No external refs found!