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  5. GSVIVT01001059001

GSVIVT01001059001


Description : Class V chitinase OS=Arabidopsis thaliana


Gene families : OG0000696 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000696_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001059001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00150p00033570 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT4G19720 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.09 OrthoFinder output from all 47 species
AT4G19800 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.06 OrthoFinder output from all 47 species
AT4G19810 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.07 OrthoFinder output from all 47 species
Adi_g077591 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11597 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20488 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Als_g62122 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17013 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19682 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25904.t1 Aspi01Gene25904 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43352.t1 Aspi01Gene43352 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47063.t1 Aspi01Gene47063 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47068.t1 Aspi01Gene47068 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47069.t1 Aspi01Gene47069 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47070.t1 Aspi01Gene47070 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53989.t1 Aspi01Gene53989 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53991.t1 Aspi01Gene53991 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64398.t1 Aspi01Gene64398 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0156.g053688 No alias EC_3.2 glycosylase & original description: CDS=140-1324 0.02 OrthoFinder output from all 47 species
Ceric.01G059200.1 Ceric.01G059200 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.26G011300.1 Ceric.26G011300 EC_3.2 glycosylase & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g21934 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06816 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17721 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47062 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47090 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12194 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16746 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27832 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g28813 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001068001 No alias Class V chitinase OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01001074001 No alias Class V chitinase OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00908 No alias Class V chitinase OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_00909 No alias Class V chitinase OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_00910 No alias Class V chitinase OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_04927 No alias Class V chitinase OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Gb_04928 No alias Class V chitinase OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_04931 No alias no description available(sp|a0a072ur65|cht5b_medtr :... 0.08 OrthoFinder output from all 47 species
Gb_06633 No alias no description available(sp|a0a1b1j8z2|chit5_lotja :... 0.04 OrthoFinder output from all 47 species
Gb_10730 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os11g27400.1 LOC_Os11g27400 no description available(sp|u5n4e3|nfh1_medtr : 191.0) &... 0.03 OrthoFinder output from all 47 species
Len_g28798 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g47633 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
MA_2425258g0010 No alias no description available(sp|u5n4e3|nfh1_medtr : 81.3) 0.06 OrthoFinder output from all 47 species
MA_31969g0010 No alias no description available(sp|a0a072ur65|cht5b_medtr :... 0.05 OrthoFinder output from all 47 species
MA_8321404g0010 No alias no description available(sp|a0a1b1j8z2|chit5_lotja :... 0.04 OrthoFinder output from all 47 species
MA_83505g0010 No alias Class V chitinase OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp8g05790.1 No alias no description available(sp|a0a1b1j8z2|chit5_lotja :... 0.02 OrthoFinder output from all 47 species
Nbi_g12634 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g24463 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35306 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42823 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g50672 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00782 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g16907 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08820 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11685 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Smo410071 No alias Class V chitinase OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc07g005090.4.1 Solyc07g005090 no description available(sp|a0a072vep0|cht5a_medtr :... 0.08 OrthoFinder output from all 47 species
Solyc07g005100.4.1 Solyc07g005100 Class V chitinase OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g15455 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32585 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g37607 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 32 358
No external refs found!