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  5. GSVIVT01000858001

GSVIVT01000858001


Description : Protein JINGUBANG OS=Arabidopsis thaliana


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000858001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00256130 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00053p00162370 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G26490 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G51930 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g30172 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g13400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05743.t1 Aspi01Gene05743 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23389.t1 Aspi01Gene23389 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010472 No alias not classified & original description: CDS=1-1746 0.04 OrthoFinder output from all 47 species
Len_g28919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g068250.2.1 Solyc01g068250 Protein JINGUBANG OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 172 199
IPR001680 WD40_repeat 340 378
No external refs found!