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  5. GSVIVT01000840001

GSVIVT01000840001


Description : Putative disease resistance protein RGA3 OS=Solanum bulbocastanum


Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000840001

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000635001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01000663001 No alias Putative disease resistance protein At3g14460... 0.04 OrthoFinder output from all 47 species
GSVIVT01000666001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.05 OrthoFinder output from all 47 species
GSVIVT01001446001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01001453001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01001457001 No alias Putative disease resistance RPP13-like protein 1... 0.06 OrthoFinder output from all 47 species
GSVIVT01013307001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01013310001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01013512001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.02 OrthoFinder output from all 47 species
GSVIVT01013535001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
GSVIVT01022856001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01022941001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01022962001 No alias Putative disease resistance protein RGA3 OS=Solanum bulbocastanum 0.02 OrthoFinder output from all 47 species
GSVIVT01023011001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01023015001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01037447001 No alias Putative disease resistance protein At3g14460... 0.04 OrthoFinder output from all 47 species
Solyc03g078300.3.1 Solyc03g078300 Putative disease resistance RPP13-like protein 1... 0.07 OrthoFinder output from all 47 species
Solyc08g007630.1.1 Solyc08g007630 Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
Solyc11g069990.2.1 Solyc11g069990 Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
Solyc11g071430.1.1 Solyc11g071430 Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
Zm00001e027057_P001 Zm00001e027057 Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 130 223
No external refs found!