GSVIVT01000622001 (GSL04, atgsl4, gsl04, ATGSL04)

Aliases : GSL04, atgsl4, gsl04, ATGSL04

Description : Cell wall.callose.callose synthase

Gene families : OG0000112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01000622001
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
AT2G13680	GLS2, ATGSL02, CALS5	callose synthase 5	0.04	OrthoFinder output from all 47 species
AT3G14780	No alias	CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm,...	0.04	OrthoFinder output from all 47 species
Ala_g27518	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g33737	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g31920	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g37113	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene07801.t2	ATGSL10, gsl10,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene51009.t1	GSL03, ATGSL3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0042.g026912	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: CDS=1-5835	0.03	OrthoFinder output from all 47 species
Azfi_s0140.g051248	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: CDS=1-5910	0.04	OrthoFinder output from all 47 species
Azfi_s0159.g053976	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description: CDS=621-5987	0.05	OrthoFinder output from all 47 species
Ceric.07G083900.1	ATGSL10, gsl10,...	EC_2.4 glycosyltransferase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.12G004600.1	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.12G070800.1	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g10697	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.08	OrthoFinder output from all 47 species
Dac_g32420	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g04013	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g05971	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g27829	GSL03, ATGSL3, ATGSL03	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_37962	GSL5, PMR4,...	callose synthase	0.03	OrthoFinder output from all 47 species
LOC_Os02g14900.1	GSL04, atgsl4,...	callose synthase	0.06	OrthoFinder output from all 47 species
LOC_Os02g58560.1	gsl12, ATGSL12,...	callose synthase	0.04	OrthoFinder output from all 47 species
Len_g22552	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g05756	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g12587	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g39610	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
MA_10426974g0030	GSL7, ATGSL07,...	callose synthase	0.04	OrthoFinder output from all 47 species
MA_246547g0010	gsl12, ATGSL12	Callose synthase 3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Mp3g24830.1	GLS2, ATGSL02, CALS5	callose synthase	0.03	OrthoFinder output from all 47 species
Msp_g13515	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g64766	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g33668	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g60182	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012611	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: CDS=395-4780	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017078	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: CDS=1-2649	0.04	OrthoFinder output from all 47 species
Sam_g14036	No alias	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g24287	No alias	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g29251	No alias	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g46585	No alias	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc07g061920.4.1	GSL04, atgsl4,...	callose synthase	0.06	OrthoFinder output from all 47 species
Solyc11g005980.3.1	GLS2, ATGSL02,...	callose synthase	0.03	OrthoFinder output from all 47 species
Spa_g38082	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g08518	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g20740	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g37266	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e000142_P001	ATGSL10, gsl10,...	callose synthase	0.02	OrthoFinder output from all 47 species
Zm00001e002613_P001	ATGSL08, ATGSL8,...	callose synthase	0.02	OrthoFinder output from all 47 species
Zm00001e014323_P001	GSL04, atgsl4,...	callose synthase	0.06	OrthoFinder output from all 47 species
Zm00001e016291_P004	gsl12, ATGSL12,...	Callose synthase 3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e016293_P001	gsl12, ATGSL12,...	callose synthase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEA	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	None	Extended
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
CC	GO:0016459	myosin complex	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR039431	Vta1/CALS_N	47	109
IPR003440	Glyco_trans_48	1184	1266
IPR003440	Glyco_trans_48	1276	1868
IPR026899	FKS1-like_dom1	304	406

External Links

No external refs found!

GSVIVT01000622001 (GSL04, atgsl4, gsl04, ATGSL04)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation