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  5. GSVIVT01000524001

GSVIVT01000524001 (VAMP726, ATVAMP726)


Aliases : VAMP726, ATVAMP726

Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.VAMP7-type protein


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000524001

Target Alias Description ECC score Gene Family Method Actions
AT2G33110 ATVAMP723, VAMP723 vesicle-associated membrane protein 723 0.03 OrthoFinder output from all 47 species
AT2G33120 SAR1, ATVAMP722, VAMP722 synaptobrevin-related protein 1 0.03 OrthoFinder output from all 47 species
Adi_g009467 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Adi_g012928 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Als_g06684 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Als_g38555 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009713 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Cba_g15943 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Ceric.27G008700.1 VAMP727,... R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Cre04.g224750 ATVAMP725, VAMP725 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Cre04.g225900 ATVAMP725, VAMP725 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Dac_g04514 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Dcu_g02420 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Dde_g21636 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Lfl_g22785 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
MA_945343g0010 VAMP726, ATVAMP726 VAMP7-type R-type SNARE longin protein 0.02 OrthoFinder output from all 47 species
Mp7g07410.1 ATVAMP721,... VAMP7-type R-type SNARE longin protein 0.04 OrthoFinder output from all 47 species
Nbi_g05177 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Pir_g18129 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Solyc01g066940.3.1 ATVAMP725,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.04 OrthoFinder output from all 47 species
Solyc02g069150.3.1 ATVAMP721,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 OrthoFinder output from all 47 species
Solyc09g061620.3.1 ATVAMP725,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
Zm00001e003924_P002 VAMP727,... VAMP7-type R-type SNARE longin protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 33 112
IPR001388 Synaptobrevin-like 130 216
No external refs found!