1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01000444001

GSVIVT01000444001


Description : DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana


Gene families : OG0001699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001699_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000444001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00037420 evm_27.TU.AmTr_v1... DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aspi01Gene30017.t1 Aspi01Gene30017 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043334 No alias not classified & original description: CDS=1-2907 0.02 OrthoFinder output from all 47 species
Gb_02140 SNM1, ATSNM1 SNM interstrand crosslink repair factor 0.01 OrthoFinder output from all 47 species
MA_31065g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_611292g0010 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g24430.1 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g12976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009882_P001 Zm00001e009882 DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR011084 DRMBL 223 343
No external refs found!