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  5. GSVIVT01000400001

GSVIVT01000400001


Description : BTB/POZ domain-containing protein At3g22104 OS=Arabidopsis thaliana


Gene families : OG0004897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004897_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000400001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00109650 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
AT1G50280 No alias Phototropic-responsive NPH3 family protein 0.04 OrthoFinder output from all 47 species
AT3G22104 No alias Phototropic-responsive NPH3 family protein 0.04 OrthoFinder output from all 47 species
Aev_g18349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70376 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene14905.t1 Aspi01Gene14905 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G063600.1 Ceric.05G063600 not classified & original description: pacid=50577873... 0.03 OrthoFinder output from all 47 species
Ceric.17G062000.1 Ceric.17G062000 not classified & original description: pacid=50618591... 0.03 OrthoFinder output from all 47 species
LOC_Os04g57800.1 LOC_Os04g57800 component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
LOC_Os07g36230.1 LOC_Os07g36230 BTB/POZ domain-containing protein At3g22104... 0.03 OrthoFinder output from all 47 species
MA_178653g0010 No alias BTB/POZ domain-containing protein At3g22104... 0.03 OrthoFinder output from all 47 species
Ppi_g03131 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026451 No alias not classified & original description: CDS=25-1905 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0260.g026870 No alias not classified & original description: CDS=25-1905 0.06 OrthoFinder output from all 47 species
Solyc07g052970.3.1 Solyc07g052970 BTB/POZ domain-containing protein At3g22104... 0.02 OrthoFinder output from all 47 species
Spa_g34890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 194 420
IPR000210 BTB/POZ_dom 3 104
No external refs found!