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  5. GSVIVT01000380001

GSVIVT01000380001 (CAM3, acam-3)


Aliases : CAM3, acam-3

Description : Calmodulin OS=Solanum lycopersicum


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000380001

Target Alias Description ECC score Gene Family Method Actions
AT2G41110 ATCAL5, CAM2 calmodulin 2 0.05 OrthoFinder output from all 47 species
AT3G43810 CAM7 calmodulin 7 0.04 OrthoFinder output from all 47 species
AT3G56800 CAM3, acam-3 calmodulin 3 0.03 OrthoFinder output from all 47 species
AT5G21274 ACAM-6, CAM6 calmodulin 6 0.03 OrthoFinder output from all 47 species
Adi_g002632 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g045838 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g075531 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13001 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g62171 ACAM-4, CAM4 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05645 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g07660 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10087 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g42996 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35000 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G013100.1 CAM3, acam-3,... calcium sensor *(CML) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.30G023400.1 ACAM-6, CAM6,... calcium sensor *(CML) & original description:... 0.06 OrthoFinder output from all 47 species
Dcu_g13835 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23417 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04153 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g17190.1 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.04 OrthoFinder output from all 47 species
LOC_Os05g41210.1 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Lfl_g26410 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429336g0010 CAM3, acam-3 Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
MA_15211g0010 CAM3, acam-3 Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
MA_66144g0010 CAM3, acam-3 Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Msp_g33776 ACAM-4, CAM4 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27435 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27897 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g072240.2.1 CAM3, acam-3,... Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Spa_g38969 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017290_P001 CAM3, acam-3,... Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Zm00001e027331_P001 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Zm00001e035910_P001 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 13 73
IPR002048 EF_hand_dom 83 146
No external refs found!