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  5. GSVIVT01000012001

GSVIVT01000012001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000012001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
AMTR_s00015p00239460 SPCH,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 OrthoFinder output from all 47 species
AT1G72210 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G65320 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g03090 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27262 FMA bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene38670.t1 FMA, Aspi01Gene38670 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53774.t1 SPCH, Aspi01Gene53774 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010552 FMA bHLH-type transcription factor & original description: CDS=1-1698 0.04 OrthoFinder output from all 47 species
Azfi_s0129.g048899 MUTE bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G037700.1 Ceric.18G037700 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g12824 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_21105 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os02g46560.1 LOC_Os02g46560 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
LOC_Os04g50090.1 LOC_Os04g50090 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
LOC_Os08g37730.1 LOC_Os08g37730 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os09g29360.1 LOC_Os09g29360 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Len_g41769 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35034 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31314 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10985 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012172 FMA bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Solyc04g074810.4.1 Solyc04g074810 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Spa_g17260 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009989_P001 Zm00001e009989 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e015903_P001 Zm00001e015903 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e023271_P001 Zm00001e023271 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Zm00001e023838_P003 Zm00001e023838 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e034422_P002 Zm00001e034422 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 127 178
No external refs found!