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  5. Solyc12g100290.3.1

Solyc12g100290.3.1 (ASHH3, SDG7, Solyc12g100290)


Aliases : ASHH3, SDG7, Solyc12g100290

Description : class II/ASH1 histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0001934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g100290.3.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT3G59960 ASHH4, SDG24 histone-lysine N-methyltransferase ASHH4 0.03 OrthoFinder output from all 47 species
AT4G30860 ASHR3, SDG4 SET domain group 4 0.03 OrthoFinder output from all 47 species
AT5G10950 No alias Tudor/PWWP/MBT superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g002442 ASHH3, SDG7 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Als_g10997 ASHR3, SDG4 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
GSVIVT01023699001 ASHR3, SDG4 Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Nbi_g03125 ASHR3, SDG4 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Spa_g52643 ASHR3, SDG4 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004529 exodeoxyribonuclease activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP HCCA
MF GO:0008409 5'-3' exonuclease activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 124 229
No external refs found!