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  5. Solyc12g100190.2.1

Solyc12g100190.2.1 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12, Solyc12g100190

Description : subfamily ABCG transporter


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g100190.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00242220 ATPDR3, PDR3,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00117010 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT2G26910 PDR4, ATPDR4 pleiotropic drug resistance 4 0.05 OrthoFinder output from all 47 species
AT3G30842 ATPDR10, PDR10 pleiotropic drug resistance 10 0.04 OrthoFinder output from all 47 species
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.04 OrthoFinder output from all 47 species
AT4G15230 ATPDR2, PDR2 pleiotropic drug resistance 2 0.04 OrthoFinder output from all 47 species
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 OrthoFinder output from all 47 species
AT4G15236 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.04 OrthoFinder output from all 47 species
Adi_g106367 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07828 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16443 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34217 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22545 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23935 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g27569 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g28174 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33457 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03117 ABCG40, PDR12,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06778 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20545 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20896 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g56716 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01667.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02114.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72851.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10025 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g41199 PDR11, ATPDR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g57880 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72947 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G041200.1 PDR6, ATPDR6,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g05852 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09408 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24516 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25261 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g33193 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38790 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15145 ATPDR7, PDR7 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20185 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017185001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01017187001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01017198001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01017201001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
GSVIVT01017337001 ABCG40, PDR12,... ABC transporter G family member 40 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01028216001 ATPDR13, PDR13 Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01035785001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01035786001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_05443 ABCG40, PDR12,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Gb_15493 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Gb_33043 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Gb_34309 ATPDR3, PDR3 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Gb_34645 PDR4, ATPDR4 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Gb_37007 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g08260.1 PDR4, ATPDR4,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os01g42410.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g52560.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g21340.1 PDR11, ATPDR11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os07g33780.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os08g43120.1 PDR11, ATPDR11,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os09g16449.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Len_g47391 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426781g0010 PDR4, ATPDR4 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_10429200g0010 PDR6, ATPDR6 ABC transporter G family member 34 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10437002g0020 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_117094g0010 ABCG40, PDR12,... no description available(sp|h6ws94|pdr1_pethy : 134.0) 0.02 OrthoFinder output from all 47 species
MA_124091g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_12781g0010 ABCG40, PDR12,... ABC transporter G family member 31 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_12965g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_135152g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
MA_165288g0010 PDR1, ATPDR1 ABC transporter G family member 36 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_3894g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
MA_911577g0010 PDR1, ATPDR1 ABC transporter G family member 36 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_949447g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_964768g0010 ABCG40, PDR12,... ABC transporter G family member 39 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
Mp2g07030.1 PDR6, ATPDR6 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp2g14210.1 PEN3, ABCG36,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Mp2g21800.1 PEN3, ABCG36,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Nbi_g04228 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06663 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g11856 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g22919 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11416 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14833 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18638 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28590 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38837 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09231 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004775 PDR6, ATPDR6 subfamily ABCG transporter & original description: CDS=697-5283 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004796 PDR6, ATPDR6 subfamily ABCG transporter & original description: CDS=1-4422 0.04 OrthoFinder output from all 47 species
Sam_g50121 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo115821 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo118688 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo412710 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo417263 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo424638 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo429390 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo441722 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo96758 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc02g055540.1.1 ATPDR3, PDR3,... ABC transporter G family member 31 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g018510.3.1 PDR4, ATPDR4,... cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc05g055330.3.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc06g065670.4.1 PDR4, ATPDR4,... cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.07 OrthoFinder output from all 47 species
Solyc08g067620.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.09 OrthoFinder output from all 47 species
Solyc09g091670.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.07 OrthoFinder output from all 47 species
Solyc12g019620.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.07 OrthoFinder output from all 47 species
Solyc12g019640.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.07 OrthoFinder output from all 47 species
Tin_g20998 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g31248 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006460_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e016714_P002 PDR4, ATPDR4,... cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e019932_P002 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e020667_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e024257_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e026148_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e033689_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e035120_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e037233_P001 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e040575_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR013581 PDR_assoc 730 793
IPR029481 ABC_trans_N 96 153
IPR003439 ABC_transporter-like_ATP-bd 860 1010
IPR013525 ABC_2_trans 513 725
IPR013525 ABC_2_trans 1156 1369
IPR003439 ABC_transporter-like_ATP-bd 178 360
No external refs found!