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  5. Solyc12g099900.1.1

Solyc12g099900.1.1 (SCL-3, SCL3, Solyc12g099900)


Aliases : SCL-3, SCL3, Solyc12g099900

Description : transcription factor (GRAS)


Gene families : OG0004383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g099900.1.1

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0002.g001177 SCL-3, SCL3 GRAS-type transcription factor & original description: CDS=1-1836 0.04 OrthoFinder output from all 47 species
LOC_Os01g71970.1 SCL-3, SCL3,... transcription factor (GRAS) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 47 465
No external refs found!