LOC_Os03g63590.1


Description : component CPSF73/Ysh1 of Cleavage and Polyadenylation Specificity Factor (CPSF) complex. nuclease CPSF73-I


Gene families : OG_01_0001402 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001402_tree ,
OG_02_0004701 (LandPlants) Phylogenetic Tree(s): OG_02_0004701_tree ,
OG_03_0005331 (SeedPlants) Phylogenetic Tree(s): OG_03_0005331_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g63590.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266610 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.02 Archaeplastida
AT2G01730 CPSF73-II,... cleavage and polyadenylation specificity factor 73 kDa subunit-II 0.03 Archaeplastida
GSVIVT01023351001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.04 Archaeplastida
MA_45580g0010 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.02 Archaeplastida
Mp2g23780.1 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.02 Archaeplastida
Pp3c5_16690V3.1 No alias cleavage and polyadenylation specificity factor 73 kDa subunit-II 0.03 Archaeplastida
GSVIVT01023351001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.03 LandPlants
GSVIVT01023351001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.03 SeedPlants
Zm00001e006396_P001 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR022712 Beta_Casp 265 386
IPR021718 CPSF73-100_C 496 694
IPR001279 Metallo-B-lactamas 42 207
IPR011108 RMMBL 400 464
No external refs found!