Solyc12g099380.3.1 (ARR1, RR1, Solyc12g099380)

Aliases : ARR1, RR1, Solyc12g099380

Description : B-type cytokinin ARR response activator. transcription factor (ARR-B)

Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g099380.3.1
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00049p00081480	ARR11,...	RNA biosynthesis.transcriptional activation.ARR-B...	0.03	OrthoFinder output from all 47 species
Aob_g03227	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.01	OrthoFinder output from all 47 species
Aop_g42522	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene10218.t1	ARR11, Aspi01Gene10218	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene10219.t1	ARR11, Aspi01Gene10219	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g57194	RR14, ARR14	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01010627001	ARR1, RR1	RNA biosynthesis.transcriptional activation.ARR-B...	0.03	OrthoFinder output from all 47 species
GSVIVT01029177001	ARR10, RR10	RNA biosynthesis.transcriptional activation.ARR-B...	0.03	OrthoFinder output from all 47 species
LOC_Os06g43910.1	RR18, ARR18,...	B-type cytokinin ARR response activator. transcription...	0.03	OrthoFinder output from all 47 species
Tin_g36879	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.02	OrthoFinder output from all 47 species
Zm00001e028539_P002	ARR11, Zm00001e028539	B-type cytokinin ARR response activator. transcription...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	19	126
IPR001005	SANT/Myb	193	242

External Links

No external refs found!