Solyc12g098920.2.1 (ATCRSH, CRSH, Solyc12g098920)

Aliases : ATCRSH, CRSH, Solyc12g098920

Description : Probable GTP diphosphokinase CRSH, chloroplastic OS=Arabidopsis thaliana (sp|q84r11|crsh_arath : 640.0)

Gene families : OG0003616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003616_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g098920.2.1
Cluster	HCCA: Cluster_64

Target	Alias	Description	ECC score	Gene Family Method
Adi_g014580	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g08360	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g17646	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0090.g042641	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: CDS=758-4711	0.05	OrthoFinder output from all 47 species
Ceric.30G071200.1	Ceric.30G071200	not classified & original description: pacid=50608643...	0.04	OrthoFinder output from all 47 species
GSVIVT01017689001	ATCRSH, CRSH	Probable GTP diphosphokinase CRSH, chloroplastic...	0.04	OrthoFinder output from all 47 species
MA_10430581g0010	ATCRSH, CRSH	Probable GTP diphosphokinase CRSH, chloroplastic...	0.03	OrthoFinder output from all 47 species
Mp1g27830.1	ATCRSH, CRSH	Probable GTP diphosphokinase CRSH, chloroplastic...	0.04	OrthoFinder output from all 47 species
Msp_g47140	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g06700	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g02055	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	479	531
IPR007685	RelA_SpoT	313	435

External Links

No external refs found!

Solyc12g098920.2.1 (ATCRSH, CRSH, Solyc12g098920)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation