Aliases : AT-HSFA5, HSFA5, Solyc12g098520
Description : transcription factor (HSF)
Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc12g098520.2.1 | |
Cluster | HCCA: Cluster_77 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00048p00075850 | HSFA1B, ATHSF3,... | RNA biosynthesis.transcriptional activation.HSF (heat... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g056671 | HSFA1B, ATHSF3,... | transcriptional regulator *(HsfA1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g085653 | HSFB4, SCZ, AT-HSFB4 | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g115584 | HSFA1B, ATHSF3,... | transcriptional regulator *(HsfA1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g41017 | HSFB4, SCZ, AT-HSFB4 | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g27045 | HSFA1B, ATHSF3,... | transcriptional regulator *(HsfA1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g37067 | HSFB4, SCZ, AT-HSFB4 | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g01767 | HSFA1B, ATHSF3,... | transcriptional regulator *(HsfA1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g22391 | AT-HSFA6B, HSFA6B | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g20880 | AT-HSFA6B, HSFA6B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g00786 | HSFA1E, ATHSFA1E | transcriptional regulator *(HsfA1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g10318 | ATHSF1, HSF1,... | transcriptional regulator *(HsfA1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g22610.1 | AT-HSFA7A,... | Heat stress transcription factor A-2a OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
Len_g01287 | ATHSFA1D, HSFA1D | transcriptional regulator *(HsfA1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g03202 | HSFA1B, ATHSF3,... | transcriptional regulator *(HsfA1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Mp4g12230.1 | HSFB4, SCZ, AT-HSFB4 | transcription factor (HSF) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g01022 | HSFB4, SCZ, AT-HSFB4 | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g01141 | HSFA1B, ATHSF3,... | transcriptional regulator *(HsfA1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g09006 | ATHSF1, HSF1,... | HSF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g21468 | AT-HSFA6B, HSFA6B | HSF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g01134 | ATHSF1, HSF1,... | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g32244 | HSFA1B, ATHSF3,... | transcriptional regulator *(HsfA1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g24032 | HSF A4A, AT-HSFA4A | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g06000 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g13332 | HSFA1E, ATHSFA1E | HSF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g35931 | HSFA1E, ATHSFA1E | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g60645 | ATHSF1, HSF1,... | HSF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g62641 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g64053 | AT-HSFA6B, HSFA6B | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0516.g027456 | HSF4, HSFB1,... | HSF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g17174 | No alias | transcriptional regulator *(HsfA1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo93081 | ATHSFA1D, HSFA1D | RNA biosynthesis.transcriptional activation.HSF (heat... | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g007070.2.1 | AT-HSFC1, HSFC1,... | transcription factor (HSF) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
CC | GO:0042025 | host cell nucleus | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | HCCA |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity | IEP | HCCA |
CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | HCCA |
BP | GO:0044093 | positive regulation of molecular function | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0110154 | RNA decapping | IEP | HCCA |
BP | GO:0110156 | methylguanosine-cap decapping | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000232 | HSF_DNA-bd | 19 | 108 |
No external refs found! |