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  5. Solyc12g098190.2.1

Solyc12g098190.2.1 (AtPP2-B10, PP2-B10,...)


Aliases : AtPP2-B10, PP2-B10, Solyc12g098190

Description : F-box protein PP2-B10 OS=Arabidopsis thaliana (sp|q9zvq6|p2b10_arath : 221.0)


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc12g098190.2.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Aob_g18734 AtPP2-B1, PP2-B1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05608 AtPP2-A13, PP2-A13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g55234 MEE66 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021680.22 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01003900001 MEE66 F-box protein At2g02240 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g07053 PP2-A15, AtPP2-A15 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426431g0010 AtPP2-B6, PP2-B6 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_413510g0010 PP2-B15, AtPP2-B15 F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g37850 PP2-A14, AtPP2-A14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00534 AtPP2-B8, PP2-B8 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc04g050990.3.1 MEE66, Solyc04g050990 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 97 260
IPR001810 F-box_dom 7 47
No external refs found!