Solyc12g097020.2.1 (Solyc12g097020)

Aliases : Solyc12g097020

Description : effector receptor (NLR)

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g097020.2.1

Target	Alias	Description	ECC score	Gene Family Method
AT5G18350	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT5G38350	No alias	Disease resistance protein (NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G41540	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.01	OrthoFinder output from all 47 species
AT5G49140	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G51630	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G58120	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.01	OrthoFinder output from all 47 species
Adi_g049530	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g080318	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01020123001	No alias	External stimuli response.biotic stress.pathogen...	0.02	OrthoFinder output from all 47 species
GSVIVT01023025001	No alias	TMV resistance protein N OS=Nicotiana glutinosa	0.06	OrthoFinder output from all 47 species
Pir_g46311	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc00g500406.1.1	Solyc00g500406	TMV resistance protein N OS=Nicotiana glutinosa...	0.07	OrthoFinder output from all 47 species
Solyc02g082050.3.1	Solyc02g082050	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Solyc07g052780.3.1	Solyc07g052780	effector receptor (NLR)	0.07	OrthoFinder output from all 47 species
Solyc07g052800.3.1	Solyc07g052800	TMV resistance protein N OS=Nicotiana glutinosa...	0.25	OrthoFinder output from all 47 species
Solyc11g062150.3.1	Solyc11g062150	effector receptor (NLR)	0.02	OrthoFinder output from all 47 species
Solyc12g097000.2.1	Solyc12g097000	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	11	178
IPR002182	NB-ARC	193	323

External Links

No external refs found!

Solyc12g097020.2.1 (Solyc12g097020)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation