Solyc12g096880.3.1 (Solyc12g096880)

Aliases : Solyc12g096880

Description : effector receptor (NLR)

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g096880.3.1
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00250200	evm_27.TU.AmTr_v1...	Disease resistance protein TAO1 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
AMTR_s00052p00159410	evm_27.TU.AmTr_v1...	External stimuli response.biotic stress.pathogen...	0.03	OrthoFinder output from all 47 species
AMTR_s00056p00215980	evm_27.TU.AmTr_v1...	Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1...	0.06	OrthoFinder output from all 47 species
AMTR_s00060p00214220	evm_27.TU.AmTr_v1...	External stimuli response.biotic stress.pathogen...	0.04	OrthoFinder output from all 47 species
AMTR_s00109p00126980	evm_27.TU.AmTr_v1...	Disease resistance protein TAO1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G17600	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.06	OrthoFinder output from all 47 species
AT1G17610	No alias	Disease resistance protein (TIR-NBS class)	0.06	OrthoFinder output from all 47 species
AT1G31540	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT1G52900	No alias	Toll-Interleukin-Resistance (TIR) domain family protein	0.04	OrthoFinder output from all 47 species
AT1G56510	WRR4, ADR2	Disease resistance protein (TIR-NBS-LRR class)	0.05	OrthoFinder output from all 47 species
AT1G56520	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT1G57630	No alias	Toll-Interleukin-Resistance (TIR) domain family protein	0.04	OrthoFinder output from all 47 species
AT1G61105	No alias	Toll-Interleukin-Resistance (TIR) domain family protein	0.05	OrthoFinder output from all 47 species
AT1G63880	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.08	OrthoFinder output from all 47 species
AT1G66090	No alias	Disease resistance protein (TIR-NBS class)	0.04	OrthoFinder output from all 47 species
AT1G69550	No alias	disease resistance protein (TIR-NBS-LRR class)	0.07	OrthoFinder output from all 47 species
AT1G72890	No alias	Disease resistance protein (TIR-NBS class)	0.03	OrthoFinder output from all 47 species
AT1G72900	No alias	Toll-Interleukin-Resistance (TIR) domain-containing protein	0.05	OrthoFinder output from all 47 species
AT1G72910	No alias	Toll-Interleukin-Resistance (TIR) domain-containing protein	0.07	OrthoFinder output from all 47 species
AT1G72930	TIR	toll/interleukin-1 receptor-like	0.06	OrthoFinder output from all 47 species
AT1G72940	No alias	Toll-Interleukin-Resistance (TIR) domain-containing protein	0.04	OrthoFinder output from all 47 species
AT2G20142	No alias	Toll-Interleukin-Resistance (TIR) domain family protein	0.03	OrthoFinder output from all 47 species
AT3G04210	No alias	Disease resistance protein (TIR-NBS class)	0.06	OrthoFinder output from all 47 species
AT3G04220	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT3G44400	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT3G44480	cog1, RPP1	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT4G11170	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.1	OrthoFinder output from all 47 species
AT4G14370	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT4G16857	No alias	No description available	0.03	OrthoFinder output from all 47 species
AT4G16860	RPP4	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT4G16920	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT4G16950	RPP5	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT4G16960	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT4G16990	RLM3	disease resistance protein (TIR-NBS class), putative	0.03	OrthoFinder output from all 47 species
AT5G11250	No alias	Disease resistance protein (TIR-NBS-LRR class)	0.1	OrthoFinder output from all 47 species
AT5G18350	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G18360	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT5G22690	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G36930	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.1	OrthoFinder output from all 47 species
AT5G38350	No alias	Disease resistance protein (NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G40060	No alias	Disease resistance protein (NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G40090	No alias	Disease resistance protein (TIR-NBS class)	0.02	OrthoFinder output from all 47 species
AT5G40910	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G41550	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT5G41740	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT5G46260	No alias	disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT5G46270	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G46450	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT5G46490	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.09	OrthoFinder output from all 47 species
AT5G46500	No alias	BEST Arabidopsis thaliana protein match is: disease...	0.06	OrthoFinder output from all 47 species
AT5G49140	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT5G51630	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT5G58120	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
Adi_g049347	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g056462	No alias	effector receptor *(NLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g14348	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g36317	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g27440	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g32850	LAZ5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g27334	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.11G099400.1	Ceric.11G099400	not classified & original description: pacid=50595890...	0.02	OrthoFinder output from all 47 species
Ceric.22G001700.1	Ceric.22G001700	not classified & original description: pacid=50614183...	0.03	OrthoFinder output from all 47 species
Dde_g24064	LAZ5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09525	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01006483001	No alias	External stimuli response.biotic stress.pathogen...	0.03	OrthoFinder output from all 47 species
GSVIVT01020123001	No alias	External stimuli response.biotic stress.pathogen...	0.03	OrthoFinder output from all 47 species
GSVIVT01020980001	No alias	External stimuli response.biotic stress.pathogen...	0.04	OrthoFinder output from all 47 species
GSVIVT01026003001	No alias	External stimuli response.biotic stress.pathogen...	0.05	OrthoFinder output from all 47 species
GSVIVT01029009001	No alias	Disease resistance-like protein DSC1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01036294001	No alias	External stimuli response.biotic stress.pathogen...	0.05	OrthoFinder output from all 47 species
GSVIVT01036408001	No alias	External stimuli response.biotic stress.pathogen...	0.05	OrthoFinder output from all 47 species
GSVIVT01037180001	No alias	External stimuli response.biotic stress.pathogen...	0.05	OrthoFinder output from all 47 species
Gb_02871	No alias	Disease resistance-like protein DSC1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_04201	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_04264	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_04749	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	OrthoFinder output from all 47 species
Gb_05909	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.07	OrthoFinder output from all 47 species
Gb_07498	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	OrthoFinder output from all 47 species
Gb_09783	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.02	OrthoFinder output from all 47 species
Gb_17461	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_17905	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	OrthoFinder output from all 47 species
Gb_20302	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Gb_21496	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Gb_23306	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_23307	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Gb_26523	No alias	effector receptor (NLR)	0.02	OrthoFinder output from all 47 species
Gb_26676	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Gb_29339	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Gb_32215	No alias	effector receptor (NLR)	0.05	OrthoFinder output from all 47 species
Gb_33268	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_33283	No alias	Disease resistance protein TAO1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Gb_36252	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_10433003g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_10433845g0020	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_10435505g0010	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
MA_10435728g0030	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_10436643g0010	No alias	Disease resistance protein TAO1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_164062g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_3692838g0010	No alias	Disease resistance-like protein DSC1 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_568309g0010	No alias	Disease resistance protein RRS1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_6801442g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_75103g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_894630g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_908452g0010	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
MA_91412g0010	No alias	Disease resistance protein TAO1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Nbi_g12596	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g23825	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g21611	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g37963	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g39828	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g41609	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g42611	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g48708	No alias	effector receptor *(NLR) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g52110	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g52570	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c4_30410V3.1	Pp3c4_30410	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
Solyc01g102880.3.1	Solyc01g102880	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Solyc02g032650.3.1	Solyc02g032650	effector receptor (NLR)	0.05	OrthoFinder output from all 47 species
Solyc04g007320.3.1	Solyc04g007320	effector receptor (NLR)	0.06	OrthoFinder output from all 47 species
Solyc11g011350.3.1	Solyc11g011350	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	11	170

External Links

No external refs found!

Solyc12g096880.3.1 (Solyc12g096880)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation