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  5. Solyc12g096590.3.1

Solyc12g096590.3.1 (COS1, Solyc12g096590)


Aliases : COS1, Solyc12g096590

Description : lumazine synthase (RibE)


Gene families : OG0004186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004186_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g096590.3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00104340 COS1,... Coenzyme metabolism.FMN/FAD biosynthesis.lumazine synthase (RibE) 0.04 OrthoFinder output from all 47 species
Adi_g002315 COS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Dcu_g07968 COS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Ehy_g08953 COS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Gb_14839 COS1 lumazine synthase (RibE) 0.03 OrthoFinder output from all 47 species
Pp3c27_2710V3.1 COS1, Pp3c27_2710 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase... 0.01 OrthoFinder output from all 47 species
Zm00001e006713_P001 COS1, Zm00001e006713 lumazine synthase (RibE) 0.07 OrthoFinder output from all 47 species
Zm00001e041804_P001 COS1, Zm00001e041804 lumazine synthase (RibE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009231 riboflavin biosynthetic process IEA Interproscan
CC GO:0009349 riboflavin synthase complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR002180 LS/RS 87 224
No external refs found!