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  5. Solyc12g089220.3.1

Solyc12g089220.3.1 (BBD1, ATBBD1, Solyc12g089220)


Aliases : BBD1, ATBBD1, Solyc12g089220

Description : Bifunctional nuclease 1 OS=Arabidopsis thaliana (sp|q9fws6|bbd1_arath : 333.0)


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g089220.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G19660 No alias Wound-responsive family protein 0.05 OrthoFinder output from all 47 species
AT1G75380 BBD1, ATBBD1 bifunctional nuclease in basal defense response 1 0.03 OrthoFinder output from all 47 species
Adi_g059475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075725 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075726 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08700.t1 Aspi01Gene08700 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G019300.1 BBD1, ATBBD1,... not classified & original description: pacid=50586572... 0.03 OrthoFinder output from all 47 species
Dcu_g10487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g39362 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59697 BBD1, ATBBD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g11770.1 BBD1, ATBBD1 Bifunctional nuclease 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g00402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g39256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 123 248
No external refs found!